Bacterial diversity in rhizosphere of Paspalum scrobiculatum L. (kodo millet) is revealed with shotgun metagenome sequencing and data analysis
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Title |
Bacterial diversity in rhizosphere of Paspalum scrobiculatum L. (kodo millet) is revealed with shotgun metagenome sequencing and data analysis
Not Available |
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Creator |
Ratna Prabha
Dhananjaya P. Singh Mukesh K. Verma Pramod Sahu Prafull Kumar |
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Subject |
Not Available
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Description |
Not Available
Rhizosphere bacterial communities of kodo millet plant was analyzed from a large metagenome sequence dataset. Plant rhizosphere samples of kodo millet was collected in replicates and the metagenomic sequence data were obtained through shotgun sequencing. Overall sequences in the dataset were 476,649 comprising total read length of 179,349,372 base pairs. Taxonomic data analysis led to characterize α-diversity of 107 species. Dominance of actinobacteria followed by unclassified sequences (derived from Bacteria) was recorded. Raw data along with the analysis result is publicly available from the MG-RAST server with ID mgm4761530.3. Not Available |
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Date |
2023-11-22T15:15:24Z
2023-11-22T15:15:24Z 2018-01-01 |
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Type |
Research Paper
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Identifier |
Bacterial diversity in rhizosphere of Paspalum scrobiculatum L. (kodo millet) is revealed with shotgun metagenome sequencing and data analysis,Ratna Prabha,Dhananjaya P. Singh, Mukesh K. Verma,Pramod Sahu,Prafull Kumar
Not Available http://krishi.icar.gov.in/jspui/handle/123456789/80917 |
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Language |
English
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Relation |
Not Available;
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Publisher |
Elsevier
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