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Replication Data for "SimuBP: A Simulator of Population Dynamics and Mutations based on Branching Processes"

Harvard Dataverse (Africa Rice Center, Bioversity International, CCAFS, CIAT, IFPRI, IRRI and WorldFish)

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Title Replication Data for "SimuBP: A Simulator of Population Dynamics and Mutations based on Branching Processes"
 
Identifier https://doi.org/10.7910/DVN/Q4IQRH
 
Creator Wu, Xiaowei
 
Publisher Harvard Dataverse
 
Description This dataset contains the following ".PDF", ".R", and ".RData" files:
(1) A PDF file "Description of the SimuBP function.PDF";
(2) R scripts for Algorithm 1 (SimuBP), Algorithm 2, and Algorithm 3;
(3) R scripts for Simulations S1a, S1b, S1c, S2a, S2b, S2c, and S3a;
(4) An R script "pLD.R" used in Simulation S1c.
(5) Results generated in Simulations S1a, S1b, S1c, S2a, S2b, and S3a.
 
Subject Mathematical Sciences
fluctuation analysis; population dynamics; mutation; branching process
 
Date 2022-12-01
 
Contributor Wu, Xiaowei