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Available cloned genes and markers for genetic improvement of biotic stress resistance in rice

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Title Available cloned genes and markers for genetic improvement of biotic stress resistance in rice
 
Creator Simon, Eliza Vie
Hechanova, Sherry Lou
Hernandez, Jose E.
Li, Charng-Pe
Tülek, Adnan
Ahn, Eok-Keun
Jairin, Jirapong
Choi, Il-Ryong
Sundaram, Raman M.
Jena, Kshirod K.
Kim, Sung-Ryul
 
Subject biotic stress
climate change
genetic improvement
rice
diseases
viruses
pests
bacteria
fungus
blast
loci
dna cloning
quantitative trait loci
yield stability
marker-assisted selection
nilaparvata lugens
 
Description Biotic stress is one of the major threats to stable rice production. Climate change affects the shifting of pest outbreaks in time and space. Genetic improvement of biotic stress resistance in rice is a cost-effective and environment-friendly way to control diseases and pests compared to other methods such as chemical spraying. Fast deployment of the available and suitable genes/alleles in local elite varieties through marker-assisted selection (MAS) is crucial for stable high-yield rice production. In this review, we focused on consolidating all the available cloned genes/alleles conferring resistance against rice pathogens (virus, bacteria, and fungus) and insect pests, the corresponding donor materials, and the DNA markers linked to the identified genes. To date, 48 genes (independent loci) have been cloned for only major biotic stresses: seven genes for brown planthopper (BPH), 23 for blast, 13 for bacterial blight, and five for viruses. Physical locations of the 48 genes were graphically mapped on the 12 rice chromosomes so that breeders can easily find the locations of the target genes and distances among all the biotic stress resistance genes and any other target trait genes. For efficient use of the cloned genes, we collected all the publically available DNA markers (~500 markers) linked to the identified genes. In case of no available cloned genes yet for the other biotic stresses, we provided brief information such as donor germplasm, quantitative trait loci (QTLs), and the related papers. All the information described in this review can contribute to the fast genetic improvement of biotic stress resistance in rice for stable high-yield rice production.
 
Date 2023-09-09
2023-11-04T13:41:31Z
2023-11-04T13:41:31Z
 
Type Journal Article
 
Identifier Simon, Eliza Vie, Sherry Lou Hechanova, Jose E. Hernandez, Charng-Pei Li, Adnan Tülek, Eok-Keun Ahn, Jirapong Jairin et al. "Available cloned genes and markers for genetic improvement of biotic stress resistance in rice." Frontiers in Plant Science 14 (2023).
1664-462X
https://hdl.handle.net/10568/132725
https://www.frontiersin.org/articles/10.3389/fpls.2023.1247014/full
https://doi.org/10.3389/fpls.2023.1247014
 
Language en
 
Rights CC-BY-4.0
Open Access
 
Format 18 p.
application/pdf
 
Source Frontiers in Plant Science