ICAR Research Data Repository for Knowledge Management
The conservation of gene models can support genome annotation
OAR@ICRISAT
View Archive Info| Field | Value | |
| Relation |
http://oar.icrisat.org/12338/
https://acsess.onlinelibrary.wiley.com/doi/full/10.1002/tpg2.20377 https://doi.org/10.1002/tpg2.20377 |
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| Title |
The conservation of gene models can support genome annotation
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| Creator |
Fernandez, C G T
Bayer, P E Petereit, J Varshney, R K Batley, J Edwards, D |
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| Subject |
Genetic Engineering
Genetics and Genomics Legume Crops |
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| Description |
Many genome annotations include false-positive gene models, leading to errors in phylogenetic and comparative studies. Here, we propose a method to support gene model prediction based on evolutionary conservation and use it to identify potentially erroneous annotations. Using this method, we developed a set of 15,345 representative gene models from 12 legume assemblies that can be used to support genome annotations for other legumes.
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| Publisher |
Wiley Periodicals LLC on behalf of Crop Science Society of America
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| Date |
2023-08-21
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| Type |
Article
PeerReviewed |
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| Format |
application/pdf
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| Language |
en
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| Rights |
cc_by_nc_nd
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| Identifier |
http://oar.icrisat.org/12338/1/The%20Plant%20Genome_16_1-7_2023.pdf
Fernandez, C G T and Bayer, P E and Petereit, J and Varshney, R K and Batley, J and Edwards, D (2023) The conservation of gene models can support genome annotation. The Plant Genome (TSI), 16 (3). pp. 1-7. ISSN 1940-3372 |
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