ICAR Research Data Repository for Knowledge Management
An R-based tool for identifying sex-linked markers from Restriction site-Associated DNA sequencing with applications to elasmobranch conservation
CSIRO RDS Repository
View Archive Info| Field | Value | |
| Title |
An R-based tool for identifying sex-linked markers from Restriction site-Associated DNA sequencing with applications to elasmobranch conservation
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| Creator |
Floriaan Devloo-Delva
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| Subject |
Genomics
Developmental genetics (incl. sex determination) Fish physiology and genetics |
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| Description |
The data was collected to study genetic markers that are located on sex chromosomes and develop and R functions to efficiently identify such markers. The raw silico and SNP markers are provided. The Rmarkdown describes the workflow of the R function with the example White Shark data, the BLAST results of sex-linked markers against reference genomes, the conditions and results for the PCR-based sex identification, and the accuracy analysis of the function. |
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| Publisher |
CSIRO
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| Contributor |
Thierry Gosselin
Paul Butcher Peter Grewe Charlie Huveneers Robin Thomson Jonathan Werry Pierre Feutry |
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| Date |
2023-09-26
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| Type |
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| Format |
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| Identifier |
csiro:60443
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| Language |
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| Coverage |
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