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http://krishi.icar.gov.in/jspui/handle/123456789/71580| Title: | First complete genome characterization of duck plague virus from India. |
| Other Titles: | Not Available |
| Authors: | Aasdev A Pawar SD Mishra A Dubey CK Patil SS Gogoi SM Bora DP Barman NN Raut AA |
| ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
| Author's Affiliated institute: | Pathogenomics Lab, ICAR - National Institute of High Security Animal Diseases, Bhopal, Madhya Pradesh 462022 India. Department of Botany, Agricultural Development Trust's Shardabai Pawar Mahila Arts, Commerce and Science College, Baramati, Maharashtra 413115 India. National Institute of Veterinary Epidemiology and Disease Informatics Department of Microbiology, College of Veterinary Science, Assam Agricultural University, Guwahati, Assam 781022 India. Department of Translational Medicine, All India Institute of Medical Sciences Bhopal, Bhopal, Madhya Pradesh 462020 India. |
| Published/ Complete Date: | 2021-10-29 |
| Project Code: | Not Available |
| Keywords: | Anatid alphaherpesvirus 1 Duck plague Duck viral enteritis Nanopore sequencing North-eastern India |
| Publisher: | Springer publishing |
| Citation: | Aasdev A, Pawar SD, Mishra A, Dubey CK, Patil SS, Gogoi SM, Bora DP, Barman NN, Raut AA. First complete genome characterization of duck plague virus from India. Virusdisease. 2021 Dec;32(4):789-796. doi: 10.1007/s13337-021-00748-6. Epub 2021 Oct 29. PMID: 34901326; PMCID: PMC8630295. |
| Series/Report no.: | Not Available; |
| Abstract/Description: | In this study, we report the complete genome sequencing of the Duck plague virus from India for the first time. The sequencing was done on the MinION nanopore sequencer from Oxford Nanopore Technologies. The closest relative is the European strain 2085v, with 99.98 and 99.8% identity at the amino acid and nucleotide level respectively. Moreover, 72 out of 77 ORFs are completely conserved between the 2 strains. The high similarity with the European strain over the only three other pathogenic strains reported from China points to the circulation of European strain in India. The fly pathways of migratory birds and co-habitation with native species being a probable reason. More complete genome data from diverse sampling locations are needed to characterize the genomic features, develop diagnostics, vaccines, and understand the evolution of the virus. |
| Description: | Not Available |
| ISSN: | 23473584 |
| Type(s) of content: | Research Paper |
| Sponsors: | Not Available |
| Language: | English |
| Name of Journal: | Virus Disease (Indian Journal of Virology) |
| Journal Type: | Peer reviewer journal |
| NAAS Rating: | 5.95 |
| Volume No.: | 32 |
| Page Number: | 789-796 |
| Name of the Division/Regional Station: | Not Available |
| Source, DOI or any other URL: | 10.1007/s13337-021-00748-6 |
| URI: | http://krishi.icar.gov.in/jspui/handle/123456789/71580 |
| Appears in Collections: | AS-NIVEDI-Publication |
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