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http://krishi.icar.gov.in/jspui/handle/123456789/63721| Title: | Whole genome sequence analysis of multi drug resistant community associated methicillin resistant Staphylococcus aureus from food fish: detection of clonal lineage ST 28 and its antimicrobial resistance and virulence genes |
| Other Titles: | Not Available |
| Authors: | Sivaraman, G. K. Vishnuvinayagam, S. Balasubramanian Ganeshan Ravikrishnan Elangovan Ardhra Vijayan Prasad, M.M. |
| ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
| Author's Affiliated institute: | ICAR::Central Institute of Fisheries Technology Division of Laboratory, ICMR- National Institute of Epidemiology, Chennai, Tamil Nadu, India Biochemical Engineering and Biotechnology, Indian Institute of Technology, Delhi, India |
| Published/ Complete Date: | 2021-05-24 |
| Project Code: | Not Available |
| Keywords: | Whole genome sequence Virulence genes Methicillin resistant Staphylococcus aureus Antimicrobial resistance genes Fish |
| Publisher: | PeerJ (O'Reilly and SAGE) |
| Citation: | Sivaraman, G. K., Visnuvinayagam, S., Balasubramanian Ganeshan, Ravikrishnan Elangovan, Ardhra Vijayan and Prasad, M. M. (2021) Whole genome sequence analysis of multi drug resistant community associated methicillin resistant Staphylococcus aureus from food fish: detection of clonal lineage ST 28 and its antimicrobial resistance and virulence genes. Peer J. 9:e11224 https://doi.org/10.7717/peerj.11224 |
| Series/Report no.: | Not Available; |
| Abstract/Description: | Methicillin-resistant staphylococcus aureus (MRSA) sequence type 28 (ST 28) and spa type t021 is a CC30, prototype of ST-30, Community Associated-MRSA (CAMRSA) (lukS-lukF plus). It is a multi-drug resistant strain harbouring staphylococcal endotoxins, haemolysins, ureolysin, serine protease, and antimicrobial resistance genes. In this study, we report the draft genome sequence of this MRSA isolated from the most commonly used food fish, ribbon fish (Trichiurus lepturus). The total number of assembled paired-end high-quality reads was 7,731,542 with a total length of 2.8Mb of 2797 predicted genes. The unique ST28/ t021 CA- MRSA in fish is the first report from India, and in addition to antibiotic resistance is known to co-harbour virulence genes, haemolysins, aureolysins and endotoxins. Comprehensive comparative genomic analysis of CA-MRSA strain7 can help further understand their diversity, genetic structure, diversity and a high degree of virulence to aid in fisheries management |
| Description: | Not Available |
| ISSN: | 2167-8359 |
| Type(s) of content: | Research Paper |
| Sponsors: | Not Available |
| Language: | English |
| Name of Journal: | PeerJ |
| Journal Type: | International Journal |
| NAAS Rating: | 8.38 |
| Impact Factor: | 2.38 |
| Volume No.: | 9 |
| Page Number: | e11224 |
| Name of the Division/Regional Station: | Not Available |
| Source, DOI or any other URL: | http://doi.org/10.7717/peerj.11224 |
| URI: | http://krishi.icar.gov.in/jspui/handle/123456789/63721 |
| Appears in Collections: | FS-CIFT-Publication |
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