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http://krishi.icar.gov.in/jspui/handle/123456789/78047| Title: | Genomic insights of beta‑lactamase producing Klebsiella quasipneumoniae subsp. similipneumoniae belonging to sequence type 1699 from retail market fsh, India |
| Other Titles: | Not Available |
| Authors: | Sudha Sajeev Muneeb Hamza Sivaraman, G. K. Sandeep Ghatak Rakshit Ojha Mendem, S. K. Devi Murugesan Claire Raisen Bibek R. Shome Mark A. Holmes |
| ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
| Author's Affiliated institute: | ICAR::Central Institute of Fisheries Technology Division of Animal Health, ICAR Research Complex for NEH Region, Umiam, India Department of Disease Investigation, ICAR-National Institute of Veterinary Epidemiology and Disease Informatics, Bengaluru, Karnataka, India Department of Veterinary Medicine, University of Cambridge, Cambridge, UK |
| Published/ Complete Date: | 2022-07-04 |
| Project Code: | Not Available |
| Keywords: | Antimicrobial resistance genes Beta-lactamase Fish K. quasipneumoniae Sequence type 1699 |
| Publisher: | Springer |
| Citation: | Sudha Sajeev, Muneeb Hamza, Sivaraman, G. K., Sandeep Ghatak, Rakshit Ojha, Mendem, S. K., Devi Murugesan, Claire Raisen, Bibek R. Shome and Mark A. Holmes (2022) Genomic insights of beta-lactamase producing Klebsiella quasipneumoniae subsp. similipneumoniae belonging to sequence type 1699 from retail market fish, India. Archives Microbiol. 204: 454. |
| Series/Report no.: | Not Available; |
| Abstract/Description: | Klebsiella quasipneumoniae is a recently described species and often misidentifed as Klebsiella pneumoniae. Here, we report the genomic characterization of Klebsiella quasipneumoniae subsp. similipneumoniae (India238 strain) isolated from fsh. The annotated genome acknowledged the presence of blaCTX-M-15, blaOKP-B-1, fosA5, oqxAB and virulence genes. The strain with ST1699 and serotypes KL52 and OL103 also harboured insertion sequences (ISs): ISKpn26 and ISEc9. Three complete phage genomes were identifed in contigs 1 and 6 of the bacterial genome, enhancing the prospects of genome manipulation. The study highlights the pitfall of conventional microbiological identifcation methods to distinguish K. pneumoniae and K. quasipneumoniae. This is the frst Indian study documenting the incidence of extended-spectrum beta-lactamase (ESBL)- producing K. quasipneumoniae subsp. similipneumoniae from a non-clinical environment, equipped with virulomes and associated mobile genetic elements. Given that fsh can act as a potential vector for transmission of antimicrobial resistance genes, our fndings have paramount importance on human health. |
| Description: | Not Available |
| ISSN: | 0302-8933 |
| Type(s) of content: | Research Paper |
| Sponsors: | Not Available |
| Language: | English |
| Name of Journal: | Archives of Microbiology |
| Journal Type: | International |
| NAAS Rating: | 8.55 |
| Impact Factor: | 2.55 |
| Volume No.: | 204 |
| Page Number: | 454 |
| Name of the Division/Regional Station: | Not Available |
| Source, DOI or any other URL: | https://doi.org/10.1007/s00203-022-03071-w |
| URI: | http://krishi.icar.gov.in/jspui/handle/123456789/78047 |
| Appears in Collections: | FS-CIFT-Publication |
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