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Analysis of the matrix protein gene sequence of the Asian lineage of peste-des-petits ruminants vaccine virus

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Title Analysis of the matrix protein gene sequence of the Asian lineage of peste-des-petits ruminants vaccine virus
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Creator D Muthuchelvan 1, A Sanyal, B P Sreenivasa, P Saravanan, P Dhar, R P Singh, R K Singh, S K Bandyopadhyay
 
Subject Indian peste-des-petits ruminants, open reading frame, African Lineage Vaccine virus, sequence divergence, matrix protein gene sequence
 
Description Not Available
The M gene nucleotide sequence of an Indian peste-des-petits ruminants (PPRV) vaccine virus ("PPRV Sungri/96") belonging to Asian lineage was determined. The gene is 1476 nucleotides long with a single open reading frame (ORF). The nucleotide and predicted amino acid sequence was compared with the homologous region of the African Lineage Vaccine virus "PPRV/Nigeria/75/1". The nucleotide sequence of the "PPRV Sungri/96" was 86% identical to that of "PPRV/Nigeria/75/1", while a homology of 93% and 95% could be observed in the ORF and amino acids level, respectively. The M gene encodes a protein of 335 amino acids, with a predicted molecular weight (MW) of 37.8 kDa. The ORF is flanked by a 3' untranslated region of 436 nucleotides and a high level of sequence divergence (approximately 30%) could be observed in this region between the vaccine viruses of Asian and African lineages. A high degree of conservation of several amino acids of this protein observed previously was also confirmed in this study.
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Date 2023-06-05T09:12:31Z
2023-06-05T09:12:31Z
2006-03-10
 
Type Research Paper
 
Identifier Muthuchelvan D, Sanyal A, Sreenivasa BP, Saravanan P, Dhar P, Singh RP, Singh RK, Bandyopadhyay SK. Analysis of the matrix protein gene sequence of the Asian lineage of peste-des-petits ruminants vaccine virus. Vet Microbiol. 2006 Mar 10;113(1-2):83-7. doi: 10.1016/j.vetmic.2005.10.014. Epub 2005 Nov 16. PMID: 16297575.
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http://krishi.icar.gov.in/jspui/handle/123456789/78033
 
Language English
 
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Publisher ELSEVIER